Replaced rotation algorithm & cleanup

5 files changed, 681 insertions, 674 deletions

diff --git a/tools/lighthousefind_tori/main.c b/tools/lighthousefind_tori/main.c
index 14d9423..aa51448 100644
--- a/tools/lighthousefind_tori/main.c
+++ b/tools/lighthousefind_tori/main.c
@@ -21,52 +21,52 @@ int best_hmd_target = 0;
 
 static void printTrackedObject(TrackedObject *to)
 {
-    for (unsigned int i = 0; i < to->numSensors; i++)
-    {
-        printf("%2.2d: [%5.5f,%5.5f] (%5.5f,%5.5f,%5.5f)\n",
-            i,
-            to->sensor[i].theta,
-            to->sensor[i].phi,
-            to->sensor[i].point.x,
-            to->sensor[i].point.y,
-            to->sensor[i].point.z
-            );
-    }
+	for (unsigned int i = 0; i < to->numSensors; i++)
+	{
+		printf("%2.2d: [%5.5f,%5.5f] (%5.5f,%5.5f,%5.5f)\n",
+			i,
+			to->sensor[i].theta,
+			to->sensor[i].phi,
+			to->sensor[i].point.x,
+			to->sensor[i].point.y,
+			to->sensor[i].point.z
+			);
+	}
 }
 
 static void runTheNumbers()
 {
-    TrackedObject *to;
+	TrackedObject *to;
 
-    to = malloc(sizeof(TrackedObject)+(PTS * sizeof(TrackedSensor)));
+	to = malloc(sizeof(TrackedObject)+(PTS * sizeof(TrackedSensor)));
 
-    int sensorCount = 0;
+	int sensorCount = 0;
 
-    for (int i = 0; i < PTS; i++)
-    {
-        // if there are enough valid counts for both the x and y sweeps for sensor i
-        if ((hmd_point_counts[2*i] > MIN_HITS_FOR_VALID) &&
-            (hmd_point_counts[2*i + 1] > MIN_HITS_FOR_VALID))
-        {
-            to->sensor[sensorCount].point.x = hmd_points[i * 3 + 0];
-            to->sensor[sensorCount].point.y = hmd_points[i * 3 + 1];
-            to->sensor[sensorCount].point.z = hmd_points[i * 3 + 2];
-            to->sensor[sensorCount].theta = hmd_point_angles[i * 2 + 0];
-            to->sensor[sensorCount].phi = hmd_point_angles[i * 2 + 1];
-            sensorCount++;
-        }
-    }
+	for (int i = 0; i < PTS; i++)
+	{
+		// if there are enough valid counts for both the x and y sweeps for sensor i
+		if ((hmd_point_counts[2*i] > MIN_HITS_FOR_VALID) &&
+			(hmd_point_counts[2*i + 1] > MIN_HITS_FOR_VALID))
+		{
+			to->sensor[sensorCount].point.x = hmd_points[i * 3 + 0];
+			to->sensor[sensorCount].point.y = hmd_points[i * 3 + 1];
+			to->sensor[sensorCount].point.z = hmd_points[i * 3 + 2];
+			to->sensor[sensorCount].theta = hmd_point_angles[i * 2 + 0] + LINMATHPI / 2;
+			to->sensor[sensorCount].phi = hmd_point_angles[i * 2 + 1] + LINMATHPI / 2;
+			sensorCount++;
+		}
+	}
 
-    to->numSensors = sensorCount;
+	to->numSensors = sensorCount;
 
-    printf("Using %d sensors to find lighthouse.\n", sensorCount);
+	printf("Using %d sensors to find lighthouse.\n", sensorCount);
 
-    Point lh = SolveForLighthouse(to, 1);
+	Point lh = SolveForLighthouse(to, 1);
 
-    printf("(%f, %f, %f)\n", lh.x, lh.y, lh.z);
+	printf("(%f, %f, %f)\n", lh.x, lh.y, lh.z);
 
-    //printTrackedObject(to);
-    free(to);
+	//printTrackedObject(to);
+	free(to);
 }
 
 
@@ -74,146 +74,144 @@ int LoadData(char Camera, const char * datafile)
 {
 
 
-    //First, read the positions of all the sensors on the HMD.
-    FILE * f = fopen("HMD_points.csv", "r");
-    int pt = 0;
-    if (!f) 
-    { 
-        fprintf(stderr, "error: can't open hmd points.\n"); 
-        return -5; 
-    }
-    while (!feof(f) && !ferror(f) && pt < PTS)
-    {
-        float fx, fy, fz;
-        int r = fscanf(f, "%g %g %g\n", &fx, &fy, &fz);
-        hmd_points[pt * 3 + 0] = fx;
-        hmd_points[pt * 3 + 1] = fy;
-        hmd_points[pt * 3 + 2] = fz;
-        pt++;
-        if (r != 3)
-        {
-            fprintf(stderr, "Not enough entries on line %d of points\n", pt);
-            return -8;
-        }
-    }
-    if (pt < PTS)
-    {
-        fprintf(stderr, "Not enough points.\n");
-        return -9;
-    }
-    fclose(f);
-    printf("Loaded %d points\n", pt);
-
-    //Read all the normals on the HMD into hmd_norms.
-    f = fopen("HMD_normals.csv", "r");
-    int nrm = 0;
-    if (!f) 
-    { 
-        fprintf(stderr, "error: can't open hmd points.\n"); 
-        return -5; 
-    }
-    while (!feof(f) && !ferror(f) && nrm < PTS)
-    {
-        float fa, fb, fc;
-        int r = fscanf(f, "%g %g %g\n", &fa, &fb, &fc);
-        hmd_norms[nrm * 3 + 0] = fa;
-        hmd_norms[nrm * 3 + 1] = fb;
-        hmd_norms[nrm * 3 + 2] = fc;
-        nrm++;
-        if (r != 3)
-        {
-            fprintf(stderr, "Not enough entries on line %d of normals\n", nrm);
-            return -8;
-        }
-    }
-    if (nrm < PTS)
-    {
-        fprintf(stderr, "Not enough points.\n");
-        return -9;
-    }
-    if (nrm != pt)
-    {
-        fprintf(stderr, "point/normal counts disagree.\n");
-        return -9;
-    }
-    fclose(f);
-    printf("Loaded %d norms\n", nrm);
-
-    //Actually load the processed data!
-    int xck = 0;
-    f = fopen(datafile, "r");
-    if (!f)
-    {
-        fprintf(stderr, "Error: cannot open %s\n", datafile);
-        exit(-11);
-    }
-    int lineno = 0;
-    while (!feof(f))
-    {
-        //Format:
-        // HMD LX 0 3433 173656.227498 327.160210 36.342361 2.990936
-        lineno++;
-        char devn[10];
-        char inn[10];
-        int id;
-        int pointct;
-        double avgTime;
-        double avgLen;
-        double stddevTime;
-        double stddevLen;
-        int ct = fscanf(f, "%9s %9s %d %d %lf %lf %lf %lf\n", devn, inn, &id, &pointct, &avgTime, &avgLen, &stddevTime, &stddevLen);
-        if (ct == 0) continue;
-        if (ct != 8)
-        {
-            fprintf(stderr, "Malformatted line, %d in processed_data.txt\n", lineno);
-        }
-        if (strcmp(devn, "HMD") != 0) continue;
-
-        if (inn[0] != Camera) continue;
-
-        int isy = inn[1] == 'Y';
-
-//        hmd_point_angles[id * 2 + isy] = (avgTime - 200000) / 200000 * 3.1415926535 / 2.0;
-        hmd_point_angles[id * 2 + isy] = (FLT)(avgTime / 48000000 * 60 * M_PI * 2);
-        
-        hmd_point_counts[id * 2 + isy] = pointct;
-    }
-    fclose(f);
-
-
-    int targpd;
-    int maxhits = 0;
-
-    for (targpd = 0; targpd < PTS; targpd++)
-    {
-        int hits = hmd_point_counts[targpd * 2 + 0];
-        if (hits > hmd_point_counts[targpd * 2 + 1]) hits = hmd_point_counts[targpd * 2 + 1];
-        //Need an X and a Y lock.  
-
-        if (hits > maxhits) { maxhits = hits; best_hmd_target = targpd; }
-    }
-    if (maxhits < MIN_HITS_FOR_VALID)
-    {
-        fprintf(stderr, "Error: Not enough data for a primary fix.\n");
-    }
-
-    return 0;
+	//First, read the positions of all the sensors on the HMD.
+	FILE * f = fopen("HMD_points.csv", "r");
+	int pt = 0;
+	if (!f) 
+	{ 
+		fprintf(stderr, "error: can't open hmd points.\n"); 
+		return -5; 
+	}
+	while (!feof(f) && !ferror(f) && pt < PTS)
+	{
+		float fx, fy, fz;
+		int r = fscanf(f, "%g %g %g\n", &fx, &fy, &fz);
+		hmd_points[pt * 3 + 0] = fx;
+		hmd_points[pt * 3 + 1] = fy;
+		hmd_points[pt * 3 + 2] = fz;
+		pt++;
+		if (r != 3)
+		{
+			fprintf(stderr, "Not enough entries on line %d of points\n", pt);
+			return -8;
+		}
+	}
+	if (pt < PTS)
+	{
+		fprintf(stderr, "Not enough points.\n");
+		return -9;
+	}
+	fclose(f);
+	printf("Loaded %d points\n", pt);
+
+	//Read all the normals on the HMD into hmd_norms.
+	f = fopen("HMD_normals.csv", "r");
+	int nrm = 0;
+	if (!f) 
+	{ 
+		fprintf(stderr, "error: can't open hmd points.\n"); 
+		return -5; 
+	}
+	while (!feof(f) && !ferror(f) && nrm < PTS)
+	{
+		float fa, fb, fc;
+		int r = fscanf(f, "%g %g %g\n", &fa, &fb, &fc);
+		hmd_norms[nrm * 3 + 0] = fa;
+		hmd_norms[nrm * 3 + 1] = fb;
+		hmd_norms[nrm * 3 + 2] = fc;
+		nrm++;
+		if (r != 3)
+		{
+			fprintf(stderr, "Not enough entries on line %d of normals\n", nrm);
+			return -8;
+		}
+	}
+	if (nrm < PTS)
+	{
+		fprintf(stderr, "Not enough points.\n");
+		return -9;
+	}
+	if (nrm != pt)
+	{
+		fprintf(stderr, "point/normal counts disagree.\n");
+		return -9;
+	}
+	fclose(f);
+	printf("Loaded %d norms\n", nrm);
+
+	//Actually load the processed data!
+	int xck = 0;
+	f = fopen(datafile, "r");
+	if (!f)
+	{
+		fprintf(stderr, "Error: cannot open %s\n", datafile);
+		exit(-11);
+	}
+	int lineno = 0;
+	while (!feof(f))
+	{
+		//Format:
+		// HMD LX 0 3433 173656.227498 327.160210 36.342361 2.990936
+		lineno++;
+		char devn[10];
+		char inn[10];
+		int id;
+		int pointct;
+		double avgTime;
+		double avgLen;
+		double stddevTime;
+		double stddevLen;
+		int ct = fscanf(f, "%9s %9s %d %d %lf %lf %lf %lf\n", devn, inn, &id, &pointct, &avgTime, &avgLen, &stddevTime, &stddevLen);
+		if (ct == 0) continue;
+		if (ct != 8)
+		{
+			fprintf(stderr, "Malformatted line, %d in processed_data.txt\n", lineno);
+		}
+		if (strcmp(devn, "HMD") != 0) continue;
+
+		if (inn[0] != Camera) continue;
+
+		int isy = inn[1] == 'Y';
+
+		hmd_point_angles[id * 2 + isy] = ((FLT)avgTime - 200000) * LINMATHPI / 200000 / 2;
+		
+		hmd_point_counts[id * 2 + isy] = pointct;
+	}
+	fclose(f);
+
+
+	int targpd;
+	int maxhits = 0;
+
+	for (targpd = 0; targpd < PTS; targpd++)
+	{
+		int hits = hmd_point_counts[targpd * 2 + 0];
+		if (hits > hmd_point_counts[targpd * 2 + 1]) hits = hmd_point_counts[targpd * 2 + 1];
+		//Need an X and a Y lock.  
+
+		if (hits > maxhits) { maxhits = hits; best_hmd_target = targpd; }
+	}
+	if (maxhits < MIN_HITS_FOR_VALID)
+	{
+		fprintf(stderr, "Error: Not enough data for a primary fix.\n");
+	}
+
+	return 0;
 }
 
 
 int main(int argc, char ** argv)
 {
-    if (argc != 3)
-    {
-        fprintf(stderr, "Error: usage: lighthousefind-torus [camera (L or R)] [datafile]\n");
-        exit(-1);
-    }
+	if (argc != 3)
+	{
+		fprintf(stderr, "Error: usage: lighthousefind-torus [camera (L or R)] [datafile]\n");
+		exit(-1);
+	}
 
-    //Load either 'L' (LH1) or 'R' (LH2) data.
-    if (LoadData(argv[1][0], argv[2])) return 5;
+	//Load either 'L' (LH1) or 'R' (LH2) data.
+	if (LoadData(argv[1][0], argv[2])) return 5;
 
+	runTheNumbers();
 
-    runTheNumbers();
-
-    return 0;
+	return 0;
 }
diff --git a/tools/lighthousefind_tori/tori_includes.h b/tools/lighthousefind_tori/tori_includes.h
index 51cd04f..4cfbcdc 100644
--- a/tools/lighthousefind_tori/tori_includes.h
+++ b/tools/lighthousefind_tori/tori_includes.h
@@ -8,23 +8,23 @@
 
 typedef struct
 {
-    double x;
-    double y;
-    double z;
+	double x;
+	double y;
+	double z;
 } Point;
 
 typedef struct
 {
-    Point point; // location of the sensor on the tracked object;
-    Point normal; // unit vector indicating the normal for the sensor
-    double theta; // "horizontal" angular measurement from lighthouse radians
-    double phi; // "vertical" angular measurement from lighthouse in radians.
+	Point point; // location of the sensor on the tracked object;
+	Point normal; // unit vector indicating the normal for the sensor
+	double theta; // "horizontal" angular measurement from lighthouse radians
+	double phi; // "vertical" angular measurement from lighthouse in radians.
 } TrackedSensor;
 
 typedef struct
 {
-    size_t numSensors;
-    TrackedSensor sensor[0];
+	size_t numSensors;
+	TrackedSensor sensor[0];
 } TrackedObject;
 
 
@@ -36,15 +36,14 @@ typedef struct
 
 typedef union
 {
-    struct
-    {
-        unsigned char Blue;
-        unsigned char Green;
-        unsigned char Red;
-        unsigned char Alpha;
-    };
-//    float float_value;
-    uint32_t long_value;
+	struct
+	{
+		unsigned char Blue;
+		unsigned char Green;
+		unsigned char Red;
+		unsigned char Alpha;
+	};
+	uint32_t long_value;
 } RGBValue;
 
 static RGBValue RED = { .Red = 255, .Green = 0, .Blue = 0, .Alpha = 125 };
@@ -56,10 +55,6 @@ static const double WORLD_BOUNDS = 100;
 
 static const float DefaultPointsPerOuterDiameter = 60;
 
-
-
-
-
 //#define TORI_DEBUG
 
 #endif
diff --git a/tools/lighthousefind_tori/torus_localizer.c b/tools/lighthousefind_tori/torus_localizer.c
index 43dd9a2..22a0ce2 100644
--- a/tools/lighthousefind_tori/torus_localizer.c
+++ b/tools/lighthousefind_tori/torus_localizer.c
@@ -9,201 +9,197 @@
 
 static double distance(Point a, Point b)
 {
-    double x = a.x - b.x;
-    double y = a.y - b.y;
-    double z = a.z - b.z;
-    return sqrt(x*x + y*y + z*z);
+	double x = a.x - b.x;
+	double y = a.y - b.y;
+	double z = a.z - b.z;
+	return sqrt(x*x + y*y + z*z);
 }
 
 Matrix3x3 GetRotationMatrixForTorus(Point a, Point b)
 {
-    Matrix3x3 result;
-    FLT v1[3] = { 0, 0, 1 };
-    FLT v2[3] = { a.x - b.x, a.y - b.y, a.z - b.z };
+	Matrix3x3 result;
+	FLT v1[3] = { 0, 0, 1 };
+	FLT v2[3] = { a.x - b.x, a.y - b.y, a.z - b.z };
 
-    normalize_v3(v2);
+	normalize3d(v2,v2);
 
-    rotation_between_vecs_to_mat3(result.val, v1, v2);
+	rotation_between_vecs_to_m3(&result, v1, v2);
 
-    FLT result2[9];
+	// Useful for debugging...
+	FLT v2b[3];
+	rotate_vec(v2b, v1, result);
 
-    rotation_between_vecs_to_m3(result2, v1, v2);
-
-    result.val[0][0] = result2[0];
-    result.val[0][1] = result2[1];
-    result.val[0][2] = result2[2];
-    result.val[1][0] = result2[3];
-    result.val[1][1] = result2[4];
-    result.val[1][2] = result2[5];
-    result.val[2][0] = result2[6];
-    result.val[2][1] = result2[7];
-    result.val[2][2] = result2[8];
-
-    return result;
+	return result;
 }
 
+//void TestGetRotationMatrixForTorus()
+//{
+//	// a={x=0.079967096447944641 y=0.045225199311971664 z=0.034787099808454514 }
+//	// b={x=0.085181400179862976 y=0.017062099650502205 z=0.046403601765632629 }
+//
+//	// a={x=0.050822000950574875 y=0.052537899464368820 z=0.033285100013017654 }
+//	// b={x=0.085181400179862976 y=0.017062099650502205 z=0.046403601765632629 }
+//
+//}
+
 Point RotateAndTranslatePoint(Point p, Matrix3x3 rot, Point newOrigin)
 {
-    Point q;
+	Point q;
 
-    double pf[3] = { p.x, p.y, p.z };
-    q.x = rot.val[0][0] * p.x + rot.val[1][0] * p.y + rot.val[2][0] * p.z + newOrigin.x;
-    q.y = rot.val[0][1] * p.x + rot.val[1][1] * p.y + rot.val[2][1] * p.z + newOrigin.y;
-    q.z = rot.val[0][2] * p.x + rot.val[1][2] * p.y + rot.val[2][2] * p.z + newOrigin.z;
+	double pf[3] = { p.x, p.y, p.z };
+	q.x = rot.val[0][0] * p.x + rot.val[1][0] * p.y + rot.val[2][0] * p.z + newOrigin.x;
+	q.y = rot.val[0][1] * p.x + rot.val[1][1] * p.y + rot.val[2][1] * p.z + newOrigin.y;
+	q.z = rot.val[0][2] * p.x + rot.val[1][2] * p.y + rot.val[2][2] * p.z + newOrigin.z;
 
-    return q;
+	return q;
 }
 
 double angleFromPoints(Point p1, Point p2, Point center)
 {
-    Point v1, v2, v1norm, v2norm;
-    v1.x = p1.x - center.x;
-    v1.y = p1.y - center.y;
-    v1.z = p1.z - center.z;
+	Point v1, v2, v1norm, v2norm;
+	v1.x = p1.x - center.x;
+	v1.y = p1.y - center.y;
+	v1.z = p1.z - center.z;
 
-    v2.x = p2.x - center.x;
-    v2.y = p2.y - center.y;
-    v2.z = p2.z - center.z;
+	v2.x = p2.x - center.x;
+	v2.y = p2.y - center.y;
+	v2.z = p2.z - center.z;
 
-    double v1mag = sqrt(v1.x * v1.x + v1.y * v1.y + v1.z * v1.z);
-    v1norm.x = v1.x / v1mag;
-    v1norm.y = v1.y / v1mag;
-    v1norm.z = v1.z / v1mag;
+	double v1mag = sqrt(v1.x * v1.x + v1.y * v1.y + v1.z * v1.z);
+	v1norm.x = v1.x / v1mag;
+	v1norm.y = v1.y / v1mag;
+	v1norm.z = v1.z / v1mag;
 
-    double v2mag = sqrt(v2.x * v2.x + v2.y * v2.y + v2.z * v2.z);
-    v2norm.x = v2.x / v2mag;
-    v2norm.y = v2.y / v2mag;
-    v2norm.z = v2.z / v2mag;
+	double v2mag = sqrt(v2.x * v2.x + v2.y * v2.y + v2.z * v2.z);
+	v2norm.x = v2.x / v2mag;
+	v2norm.y = v2.y / v2mag;
+	v2norm.z = v2.z / v2mag;
 
-    double res = v1norm.x * v2norm.x + v1norm.y * v2norm.y + v1norm.z * v2norm.z;
+	double res = v1norm.x * v2norm.x + v1norm.y * v2norm.y + v1norm.z * v2norm.z;
 
-    double angle = acos(res);
+	double angle = acos(res);
 
-    return angle;
+	return angle;
 }
 
 Point midpoint(Point a, Point b)
 {
-    Point m;
-    m.x = (a.x + b.x) / 2;
-    m.y = (a.y + b.y) / 2;
-    m.z = (a.z + b.z) / 2;
+	Point m;
+	m.x = (a.x + b.x) / 2;
+	m.y = (a.y + b.y) / 2;
+	m.z = (a.z + b.z) / 2;
 
-    return m;
+	return m;
 }
 
 
 
 
-// This is the second incarnation of the torus generator.  It is intended to differ from the initial torus generator by
-// producing a point cloud of a torus where the points density is more uniform across the torus.  This will allow
-// us to be more efficient in finding a solution.
+// This torus generator creates a point cloud of the given torus, and attempts to keep the 
+// density of the points fairly uniform across the surface of the torus.
 void partialTorusGenerator(
-    Point p1,
-    Point p2,
-    double toroidalStartAngle,
-    double toroidalEndAngle,
-    double poloidalStartAngle,
-    double poloidalEndAngle,
-    double lighthouseAngle,
-    double toroidalPrecision,
-    Point **pointCloud)
+	Point p1,
+	Point p2,
+	double toroidalStartAngle,
+	double toroidalEndAngle,
+	double poloidalStartAngle,
+	double poloidalEndAngle,
+	double lighthouseAngle,
+	double toroidalPrecision,
+	Point **pointCloud)
 {
-    double poloidalRadius = 0;
-    double toroidalRadius = 0;
+	double poloidalRadius = 0;
+	double toroidalRadius = 0;
 
-    Point m = midpoint(p1, p2);
-    double distanceBetweenPoints = distance(p1, p2);
+	Point m = midpoint(p1, p2);
+	double distanceBetweenPoints = distance(p1, p2);
 
-    // ideally should only need to be lighthouseAngle, but increasing it here keeps us from accidentally
-    // thinking the tori converge at the location of the tracked object instead of at the lighthouse.
-    double centralAngleToIgnore = lighthouseAngle * 3;
+	// ideally should only need to be lighthouseAngle, but increasing it here keeps us from accidentally
+	// thinking the tori converge at the location of the tracked object instead of at the lighthouse.
+	double centralAngleToIgnore = lighthouseAngle * 3;
 
-    Matrix3x3 rot = GetRotationMatrixForTorus(p1, p2);
+	Matrix3x3 rot = GetRotationMatrixForTorus(p1, p2);
 
-    toroidalRadius = distanceBetweenPoints / (2 * tan(lighthouseAngle));
+	toroidalRadius = distanceBetweenPoints / (2 * tan(lighthouseAngle));
 
-    poloidalRadius = sqrt(pow(toroidalRadius, 2) + pow(distanceBetweenPoints / 2, 2));
+	poloidalRadius = sqrt(pow(toroidalRadius, 2) + pow(distanceBetweenPoints / 2, 2));
 
-    double poloidalPrecision = M_PI * 2 / toroidalPrecision;
+	double poloidalPrecision = M_PI * 2 / toroidalPrecision;
 
-    //unsigned int pointCount = toroidalPrecision * toroidalPrecision / 2 * (toroidalEndAngle - toroidalStartAngle) / (M_PI * 2) * (poloidalEndAngle - poloidalStartAngle) / (M_PI * 1);
-    //unsigned int pointCount = (unsigned int)(toroidalPrecision *  ((M_PI - lighthouseAngle) * 2 / poloidalPrecision + 1) + 1);
-    // TODO: This calculation of the number of points that we will generate is excessively large (probably by about a factor of 2 or more) We can do better.
-    //float pointEstimate = (pointCount + 1000) * sizeof(Point) * 2 * M_PI / (toroidalEndAngle - toroidalStartAngle);
 
-    unsigned int pointCount = 0;
+	unsigned int pointCount = 0;
 
-    for (double poloidalStep = poloidalStartAngle; poloidalStep < poloidalEndAngle; poloidalStep += poloidalPrecision)
-    {
-        // here, we specify the number of steps that will occur on the toroidal circle for a given poloidal angle
-        // We do this so our point cloud will have a more even distribution of points across the surface of the torus.
-        double steps = (cos(poloidalStep) + 1) / 2 * toroidalPrecision;
+	// This loop tries to (cheaply) figure out an upper bound on the number of points we'll have in our point cloud
+	for (double poloidalStep = poloidalStartAngle; poloidalStep < poloidalEndAngle; poloidalStep += poloidalPrecision)
+	{
+		// here, we specify the number of steps that will occur on the toroidal circle for a given poloidal angle
+		// We do this so our point cloud will have a more even distribution of points across the surface of the torus.
+		double steps = (cos(poloidalStep) + 1) / 2 * toroidalPrecision;
 
-        double step_distance = 2 * M_PI / steps;
+		double step_distance = 2 * M_PI / steps;
 
-        pointCount += (unsigned int)((toroidalEndAngle - toroidalStartAngle) / step_distance + 2);
-    }
+		pointCount += (unsigned int)((toroidalEndAngle - toroidalStartAngle) / step_distance + 2);
+	}
 
-    *pointCloud = malloc(pointCount * sizeof(Point) );
+	*pointCloud = malloc(pointCount * sizeof(Point) );
 
-    assert(0 != *pointCloud);
+	assert(0 != *pointCloud);
 
-    (*pointCloud)[pointCount - 1].x = -1000;
-    (*pointCloud)[pointCount - 1].y = -1000;
-    (*pointCloud)[pointCount - 1].z = -1000; // need a better magic number or flag, but this'll do for now.
+	(*pointCloud)[pointCount - 1].x = -1000;
+	(*pointCloud)[pointCount - 1].y = -1000;
+	(*pointCloud)[pointCount - 1].z = -1000; // need a better magic number or flag, but this'll do for now.
 
-    size_t currentPoint = 0;
+	size_t currentPoint = 0;
 
-    for (double poloidalStep = poloidalStartAngle; poloidalStep < poloidalEndAngle; poloidalStep += poloidalPrecision)
-    {
-        // here, we specify the number of steps that will occur on the toroidal circle for a given poloidal angle
-        // We do this so our point cloud will have a more even distribution of points across the surface of the torus.
-        double steps = (cos(poloidalStep) + 1) / 2 * toroidalPrecision;
+	for (double poloidalStep = poloidalStartAngle; poloidalStep < poloidalEndAngle; poloidalStep += poloidalPrecision)
+	{
+		// here, we specify the number of steps that will occur on the toroidal circle for a given poloidal angle
+		// We do this so our point cloud will have a more even distribution of points across the surface of the torus.
+		double steps = (cos(poloidalStep) + 1) / 2 * toroidalPrecision;
 
-        double step_distance = 2 * M_PI / steps;
+		double step_distance = 2 * M_PI / steps;
 
-        //for (double toroidalStep = toroidalStartAngle; toroidalStep < toroidalEndAngle; toroidalStep += M_PI / 40)
-        for (double toroidalStep = toroidalStartAngle; toroidalStep < toroidalEndAngle; toroidalStep += step_distance)
-        {
-            if (currentPoint >= pointCount - 1)
-            {
-                int a = 0;
-            }
-            assert(currentPoint < pointCount - 1);
-            (*pointCloud)[currentPoint].x = (toroidalRadius + poloidalRadius*cos(poloidalStep))*cos(toroidalStep);
-            (*pointCloud)[currentPoint].y = (toroidalRadius + poloidalRadius*cos(poloidalStep))*sin(toroidalStep);
-            (*pointCloud)[currentPoint].z = poloidalRadius*sin(poloidalStep);
-            (*pointCloud)[currentPoint] = RotateAndTranslatePoint((*pointCloud)[currentPoint], rot, m);
+		//for (double toroidalStep = toroidalStartAngle; toroidalStep < toroidalEndAngle; toroidalStep += M_PI / 40)
+		for (double toroidalStep = toroidalStartAngle; toroidalStep < toroidalEndAngle; toroidalStep += step_distance)
+		{
+			if (currentPoint >= pointCount - 1)
+			{
+				int a = 0;
+			}
+			assert(currentPoint < pointCount - 1);
+			(*pointCloud)[currentPoint].x = (toroidalRadius + poloidalRadius*cos(poloidalStep))*cos(toroidalStep);
+			(*pointCloud)[currentPoint].y = (toroidalRadius + poloidalRadius*cos(poloidalStep))*sin(toroidalStep);
+			(*pointCloud)[currentPoint].z = poloidalRadius*sin(poloidalStep);
+			(*pointCloud)[currentPoint] = RotateAndTranslatePoint((*pointCloud)[currentPoint], rot, m);
 
-            // TODO: HACK!!! Instead of doing anything with normals, we're "assuming" that all sensors point directly up
-            // and hence we know that nothing with a negative z value is a possible lightouse location.
-            // Before this code can go live, we'll have to take the normals into account and remove this hack.
-            if ((*pointCloud)[currentPoint].z > 0)
-            {
-                currentPoint++;
-            }
-        }
-    }
+			// TODO: HACK!!! Instead of doing anything with normals, we're "assuming" that all sensors point directly up
+			// and hence we know that nothing with a negative z value is a possible lightouse location.
+			// Before this code can go live, we'll have to take the normals into account and remove this hack.
+			if ((*pointCloud)[currentPoint].z > 0)
+			{
+				currentPoint++;
+			}
+		}
+	}
 
 #ifdef TORI_DEBUG
-    printf("%d / %d\n", currentPoint, pointCount);
+	printf("%d / %d\n", currentPoint, pointCount);
 #endif
-    (*pointCloud)[currentPoint].x = -1000;
-    (*pointCloud)[currentPoint].y = -1000;
-    (*pointCloud)[currentPoint].z = -1000;
+	(*pointCloud)[currentPoint].x = -1000;
+	(*pointCloud)[currentPoint].y = -1000;
+	(*pointCloud)[currentPoint].z = -1000;
 }
 
 void torusGenerator(Point p1, Point p2, double lighthouseAngle, Point **pointCloud)
 {
 
-    double centralAngleToIgnore = lighthouseAngle * 6;
+	double centralAngleToIgnore = lighthouseAngle * 6;
 
-    centralAngleToIgnore = 20.0 / 180.0 * M_PI;
+	centralAngleToIgnore = 20.0 / 180.0 * M_PI;
 
-    partialTorusGenerator(p1, p2, 0, M_PI * 2, centralAngleToIgnore + M_PI, M_PI * 3 - centralAngleToIgnore, lighthouseAngle, DefaultPointsPerOuterDiameter, pointCloud);
+	partialTorusGenerator(p1, p2, 0, M_PI * 2, centralAngleToIgnore + M_PI, M_PI * 3 - centralAngleToIgnore, lighthouseAngle, DefaultPointsPerOuterDiameter, pointCloud);
 
-    return;
+	return;
 }
 
 
@@ -218,163 +214,163 @@ void torusGenerator(Point p1, Point p2, double lighthouseAngle, Point **pointClo
 // That way, the caller doesn't have to draw the entire torus in high resolution, just the part of the torus
 // that is most likely to contain the best solution.
 void estimateToroidalAndPoloidalAngleOfPoint(
-    Point torusP1,
-    Point torusP2,
-    double lighthouseAngle,
-    Point point,
-    double *toroidalAngle,
-    double *poloidalAngle)
+	Point torusP1,
+	Point torusP2,
+	double lighthouseAngle,
+	Point point,
+	double *toroidalAngle,
+	double *poloidalAngle)
 {
-    // this is the rotation matrix that shows how to rotate the torus from being in a simple "default" orientation
-    // into the coordinate system of the tracked object
-    Matrix3x3 rot = GetRotationMatrixForTorus(torusP1, torusP2);
-
-    // We take the inverse of the rotation matrix, and this now defines a rotation matrix that will take us from
-    // the tracked object coordinate system into the "easy" or "default" coordinate system of the torus.
-    // Using this will allow us to derive angles much more simply by being in a "friendly" coordinate system.
-    rot = inverseM33(rot);
-    Point origin;
-    origin.x = 0;
-    origin.y = 0;
-    origin.z = 0;
-
-    Point m = midpoint(torusP1, torusP2);
-
-    // in this new coordinate system, we'll rename all of the points we care about to have an "F" after them
-    // This will be their representation in the "friendly" coordinate system
-    Point pointF;
-
-    // Okay, I lied a little above.  In addition to the rotation matrix that we care about, there was also
-    // a translation that we did to move the origin.  If we're going to get to the "friendly" coordinate system
-    // of the torus, we need to first undo the translation, then undo the rotation.  Below, we're undoing the translation.
-    pointF.x = point.x - m.x;
-    pointF.y = point.y - m.y;
-    pointF.z = point.z - m.z;
-
-    // now we'll undo the rotation part.
-    pointF = RotateAndTranslatePoint(pointF, rot, origin);
-
-    // hooray, now pointF is in our more-friendly coordinate system.  
-
-    // Now, it's time to figure out the toroidal angle to that point.  This should be pretty easy. 
-    // We will "flatten" the z dimension to only look at the x and y values.  Then, we just need to measure the 
-    // angle between a vector to pointF and a vector along the x axis.  
-
-    *toroidalAngle = atan(pointF.y / pointF.x);
-    if (pointF.x < 0)
-    {
-        *toroidalAngle += M_PI;
-    }
-
-    // SCORE!! We've got the toroidal angle.  We're half done!
-
-    // Okay, what next...?  Now, we will need to rotate the torus *again* to make it easy to
-    // figure out the poloidal angle.  We should rotate the entire torus by the toroidal angle
-    // so that the point we're focusin on will lie on the x/z plane.  We then should translate the
-    // torus so that the center of the poloidal circle is at the origin.  At that point, it will
-    // be trivial to determine the poloidal angle-- it will be the angle on the xz plane of a 
-    // vector from the origin to the point.
-
-    // okay, instead of rotating the torus & point by the toroidal angle to get the point on
-    // the xz plane, we're going to take advantage of the radial symmetry of the torus
-    // (i.e. it's symmetric about the point we'd want to rotate it, so the rotation wouldn't 
-    // change the torus at all).  Therefore, we'll leave the torus as is, but we'll rotate the point
-    // This will only impact the x and y coordinates, and we'll use "G" as the postfix to represent
-    // this new coordinate system
-
-    Point pointG;
-    pointG.z = pointF.z;
-    pointG.y = 0;
-    pointG.x = sqrt(SQUARED(pointF.x) + SQUARED(pointF.y));
-
-    // okay, that ended up being easier than I expected.  Now that we have the point on the xZ plane,
-    // our next step will be to shift it down so that the center of the poloidal circle is at the origin.
-    // As you may have noticed, y has now gone to zero, and from here on out, we can basically treat
-    // this as a 2D problem.  I think we're getting close...
-
-    // I stole these lines from the torus generator.  Gonna need the poloidal radius.
-    double distanceBetweenPoints = distance(torusP1, torusP2); // we don't care about the coordinate system of these points because we're just getting distance.
-    double toroidalRadius = distanceBetweenPoints / (2 * tan(lighthouseAngle));
-    double poloidalRadius = sqrt(pow(toroidalRadius, 2) + pow(distanceBetweenPoints / 2, 2));
-
-    // The center of the polidal circle already lies on the z axis at this point, so we won't shift z at all. 
-    // The shift along the X axis will be the toroidal radius.  
-
-    Point pointH;
-    pointH.z = pointG.z;
-    pointH.y = pointG.y;
-    pointH.x = pointG.x - toroidalRadius;
-
-    // Okay, almost there.  If we treat pointH as a vector on the XZ plane, if we get its angle,
-    // that will be the poloidal angle we're looking for.  (crosses fingers)
-
-    *poloidalAngle = atan(pointH.z / pointH.x);
-    if (pointH.x < 0)
-    {
-        *poloidalAngle += M_PI;
-    }
-
-    // Wow, that ended up being not so much code, but a lot of interesting trig.
-    // can't remember the last time I spent so much time working through each line of code.
-
-    return;
+	// this is the rotation matrix that shows how to rotate the torus from being in a simple "default" orientation
+	// into the coordinate system of the tracked object
+	Matrix3x3 rot = GetRotationMatrixForTorus(torusP1, torusP2);
+
+	// We take the inverse of the rotation matrix, and this now defines a rotation matrix that will take us from
+	// the tracked object coordinate system into the "easy" or "default" coordinate system of the torus.
+	// Using this will allow us to derive angles much more simply by being in a "friendly" coordinate system.
+	rot = inverseM33(rot);
+	Point origin;
+	origin.x = 0;
+	origin.y = 0;
+	origin.z = 0;
+
+	Point m = midpoint(torusP1, torusP2);
+
+	// in this new coordinate system, we'll rename all of the points we care about to have an "F" after them
+	// This will be their representation in the "friendly" coordinate system
+	Point pointF;
+
+	// Okay, I lied a little above.  In addition to the rotation matrix that we care about, there was also
+	// a translation that we did to move the origin.  If we're going to get to the "friendly" coordinate system
+	// of the torus, we need to first undo the translation, then undo the rotation.  Below, we're undoing the translation.
+	pointF.x = point.x - m.x;
+	pointF.y = point.y - m.y;
+	pointF.z = point.z - m.z;
+
+	// now we'll undo the rotation part.
+	pointF = RotateAndTranslatePoint(pointF, rot, origin);
+
+	// hooray, now pointF is in our more-friendly coordinate system.  
+
+	// Now, it's time to figure out the toroidal angle to that point.  This should be pretty easy. 
+	// We will "flatten" the z dimension to only look at the x and y values.  Then, we just need to measure the 
+	// angle between a vector to pointF and a vector along the x axis.  
+
+	*toroidalAngle = atan(pointF.y / pointF.x);
+	if (pointF.x < 0)
+	{
+		*toroidalAngle += M_PI;
+	}
+
+	// SCORE!! We've got the toroidal angle.  We're half done!
+
+	// Okay, what next...?  Now, we will need to rotate the torus *again* to make it easy to
+	// figure out the poloidal angle.  We should rotate the entire torus by the toroidal angle
+	// so that the point we're focusin on will lie on the x/z plane.  We then should translate the
+	// torus so that the center of the poloidal circle is at the origin.  At that point, it will
+	// be trivial to determine the poloidal angle-- it will be the angle on the xz plane of a 
+	// vector from the origin to the point.
+
+	// okay, instead of rotating the torus & point by the toroidal angle to get the point on
+	// the xz plane, we're going to take advantage of the radial symmetry of the torus
+	// (i.e. it's symmetric about the point we'd want to rotate it, so the rotation wouldn't 
+	// change the torus at all).  Therefore, we'll leave the torus as is, but we'll rotate the point
+	// This will only impact the x and y coordinates, and we'll use "G" as the postfix to represent
+	// this new coordinate system
+
+	Point pointG;
+	pointG.z = pointF.z;
+	pointG.y = 0;
+	pointG.x = sqrt(SQUARED(pointF.x) + SQUARED(pointF.y));
+
+	// okay, that ended up being easier than I expected.  Now that we have the point on the xZ plane,
+	// our next step will be to shift it down so that the center of the poloidal circle is at the origin.
+	// As you may have noticed, y has now gone to zero, and from here on out, we can basically treat
+	// this as a 2D problem.  I think we're getting close...
+
+	// I stole these lines from the torus generator.  Gonna need the poloidal radius.
+	double distanceBetweenPoints = distance(torusP1, torusP2); // we don't care about the coordinate system of these points because we're just getting distance.
+	double toroidalRadius = distanceBetweenPoints / (2 * tan(lighthouseAngle));
+	double poloidalRadius = sqrt(pow(toroidalRadius, 2) + pow(distanceBetweenPoints / 2, 2));
+
+	// The center of the polidal circle already lies on the z axis at this point, so we won't shift z at all. 
+	// The shift along the X axis will be the toroidal radius.  
+
+	Point pointH;
+	pointH.z = pointG.z;
+	pointH.y = pointG.y;
+	pointH.x = pointG.x - toroidalRadius;
+
+	// Okay, almost there.  If we treat pointH as a vector on the XZ plane, if we get its angle,
+	// that will be the poloidal angle we're looking for.  (crosses fingers)
+
+	*poloidalAngle = atan(pointH.z / pointH.x);
+	if (pointH.x < 0)
+	{
+		*poloidalAngle += M_PI;
+	}
+
+	// Wow, that ended up being not so much code, but a lot of interesting trig.
+	// can't remember the last time I spent so much time working through each line of code.
+
+	return;
 }
 
 double FindSmallestDistance(Point p, Point* cloud)
 {
-    Point *cp = cloud;
-    double smallestDistance = 10000000000000.0;
-
-    while (cp->x != -1000 || cp->y != -1000 || cp->z != -1000)
-    {
-        double distance = (SQUARED(cp->x - p.x) + SQUARED(cp->y - p.y) + SQUARED(cp->z - p.z));
-        if (distance < smallestDistance)
-        {
-            smallestDistance = distance;
-        }
-        cp++;
-    }
-    smallestDistance = sqrt(smallestDistance);
-    return smallestDistance;
+	Point *cp = cloud;
+	double smallestDistance = 10000000000000.0;
+
+	while (cp->x != -1000 || cp->y != -1000 || cp->z != -1000)
+	{
+		double distance = (SQUARED(cp->x - p.x) + SQUARED(cp->y - p.y) + SQUARED(cp->z - p.z));
+		if (distance < smallestDistance)
+		{
+			smallestDistance = distance;
+		}
+		cp++;
+	}
+	smallestDistance = sqrt(smallestDistance);
+	return smallestDistance;
 }
 
 // Given a cloud and a list of clouds, find the point on masterCloud that best matches clouds.
 Point findBestPointMatch(Point *masterCloud, Point** clouds, int numClouds)
 {
 
-    Point bestMatch = { 0 };
-    double bestDistance = 10000000000000.0;
-    Point *cp = masterCloud;
-    int point = 0;
-    while (cp->x != -1000 || cp->y != -1000 || cp->z != -1000)
-    {
-        point++;
+	Point bestMatch = { 0 };
+	double bestDistance = 10000000000000.0;
+	Point *cp = masterCloud;
+	int point = 0;
+	while (cp->x != -1000 || cp->y != -1000 || cp->z != -1000)
+	{
+		point++;
 #ifdef TORI_DEBUG
-        if (point % 100 == 0)
-        {
-            printf(".");
-        }
+		if (point % 100 == 0)
+		{
+			printf(".");
+		}
 #endif
-        double currentDistance = 0;
-        for (int i = 0; i < numClouds; i++)
-        {
-            if (clouds[i] == masterCloud)
-            {
-                continue;
-            }
-            Point* cloud = clouds[i];
-            currentDistance += FindSmallestDistance(*cp, cloud);
-        }
-
-        if (currentDistance < bestDistance)
-        {
-            bestDistance = currentDistance;
-            bestMatch = *cp;
-        }
-        cp++;
-    }
-
-    return bestMatch;
+		double currentDistance = 0;
+		for (int i = 0; i < numClouds; i++)
+		{
+			if (clouds[i] == masterCloud)
+			{
+				continue;
+			}
+			Point* cloud = clouds[i];
+			currentDistance += FindSmallestDistance(*cp, cloud);
+		}
+
+		if (currentDistance < bestDistance)
+		{
+			bestDistance = currentDistance;
+			bestMatch = *cp;
+		}
+		cp++;
+	}
+
+	return bestMatch;
 }
 
 
@@ -382,197 +378,215 @@ Point findBestPointMatch(Point *masterCloud, Point** clouds, int numClouds)
 
 typedef struct
 {
-    Point a;
-    Point b;
-    double angle;
+	Point a;
+	Point b;
+	double angle;
 } PointsAndAngle;
 
 double angleBetweenSensors(TrackedSensor *a, TrackedSensor *b)
 {
-    double angle = acos(cos(a->phi - b->phi)*cos(a->theta - b->theta));
-    double angle2 = acos(cos(b->phi - a->phi)*cos(b->theta - a->theta));
+	double angle = acos(cos(a->phi - b->phi)*cos(a->theta - b->theta));
+	double angle2 = acos(cos(b->phi - a->phi)*cos(b->theta - a->theta));
 
-    return angle;
+	return angle;
 }
 double pythAngleBetweenSensors2(TrackedSensor *a, TrackedSensor *b)
 {
-    double p = (a->phi - b->phi);
-    double d = (a->theta - b->theta);
+	double p = (a->phi - b->phi);
+	double d = (a->theta - b->theta);
 
-    double adjd = sin((a->phi + b->phi) / 2);
-    double adjP = sin((a->theta + b->theta) / 2);
-    double pythAngle = sqrt(SQUARED(p*adjP) + SQUARED(d*adjd));
-    return pythAngle;
+	double adjd = sin((a->phi + b->phi) / 2);
+	double adjP = sin((a->theta + b->theta) / 2);
+	double pythAngle = sqrt(SQUARED(p*adjP) + SQUARED(d*adjd));
+	return pythAngle;
 }
 Point SolveForLighthouse(TrackedObject *obj, char doLogOutput)
 {
-    PointsAndAngle pna[MAX_POINT_PAIRS];
-    //Point lh = { 10, 0, 200 };
-
-    size_t pnaCount = 0;
-    for (unsigned int i = 0; i < obj->numSensors; i++)
-    {
-        for (unsigned int j = 0; j < i; j++)
-        {
-            if (pnaCount < MAX_POINT_PAIRS)
-            {
-                pna[pnaCount].a = obj->sensor[i].point;
-                pna[pnaCount].b = obj->sensor[j].point;
-
-                pna[pnaCount].angle = pythAngleBetweenSensors2(&obj->sensor[i], &obj->sensor[j]);
-
-                double pythAngle = sqrt(SQUARED(obj->sensor[i].phi - obj->sensor[j].phi) + SQUARED(obj->sensor[i].theta - obj->sensor[j].theta));
-
-                //double tmp = angleFromPoints(pna[pnaCount].a, pna[pnaCount].b, lh);
-
-                pnaCount++;
-            }
-        }
-    }
-
-    //Point **pointCloud = malloc(sizeof(Point*)* pnaCount);
-    Point **pointCloud = malloc(sizeof(void*)* pnaCount);
-
-    FILE *f = NULL;
-    if (doLogOutput)
-    {
-        f = fopen("pointcloud2.pcd", "wb");
-        writePcdHeader(f);
-        writeAxes(f);
-    }
-
-    for (unsigned int i = 0; i < pnaCount; i++)
-    {
-        torusGenerator(pna[i].a, pna[i].b, pna[i].angle, &(pointCloud[i]));
-        if (doLogOutput)
-        {
-            writePointCloud(f, pointCloud[i], COLORS[i%MAX_COLORS]);
-        }
-
-    }
-
-    Point bestMatchA = findBestPointMatch(pointCloud[0], pointCloud, pnaCount);
-
-    if (doLogOutput)
-    {
-        markPointWithStar(f, bestMatchA, 0xFF0000);
-    }
+	PointsAndAngle pna[MAX_POINT_PAIRS];
+
+	size_t pnaCount = 0;
+	for (unsigned int i = 0; i < obj->numSensors; i++)
+	{
+		for (unsigned int j = 0; j < i; j++)
+		{
+			if (pnaCount < MAX_POINT_PAIRS)
+			{
+				pna[pnaCount].a = obj->sensor[i].point;
+				pna[pnaCount].b = obj->sensor[j].point;
+
+				pna[pnaCount].angle = pythAngleBetweenSensors2(&obj->sensor[i], &obj->sensor[j]);
+
+				double pythAngle = sqrt(SQUARED(obj->sensor[i].phi - obj->sensor[j].phi) + SQUARED(obj->sensor[i].theta - obj->sensor[j].theta));
+
+				pnaCount++;
+			}
+		}
+	}
+
+	Point **pointCloud = malloc(sizeof(void*)* pnaCount);
+
+	FILE *f = NULL;
+	if (doLogOutput)
+	{
+		f = fopen("pointcloud2.pcd", "wb");
+		writePcdHeader(f);
+		writeAxes(f);
+	}
+
+	for (unsigned int i = 0; i < pnaCount; i++)
+	{
+		torusGenerator(pna[i].a, pna[i].b, pna[i].angle, &(pointCloud[i]));
+		if (doLogOutput)
+		{
+			writePointCloud(f, pointCloud[i], COLORS[i%MAX_COLORS]);
+		}
+
+	}
+
+	Point bestMatchA = findBestPointMatch(pointCloud[0], pointCloud, pnaCount);
+
+	for (unsigned int i = 0; i < pnaCount; i++)
+	{
+		free(pointCloud[i]);
+		pointCloud[i] = NULL;
+	}
+
+	if (doLogOutput)
+	{
+		markPointWithStar(f, bestMatchA, 0xFF0000);
+	}
 #ifdef TORI_DEBUG
-    printf("(%f,%f,%f)\n", bestMatchA.x, bestMatchA.y, bestMatchA.z);
+	printf("(%f,%f,%f)\n", bestMatchA.x, bestMatchA.y, bestMatchA.z);
 #endif
-    // Now, let's add an extra patch or torus near the point we just found.
+	// Now, let's add an extra patch or torus near the point we just found.
+
+	double toroidalAngle = 0;
+	double poloidalAngle = 0;
 
-    double toroidalAngle = 0;
-    double poloidalAngle = 0;
 
 
+	Point **pointCloud2 = malloc(sizeof(void*)* pnaCount);
 
-    Point **pointCloud2 = malloc(sizeof(void*)* pnaCount);
+	for (unsigned int i = 0; i < pnaCount; i++)
+	{
+		estimateToroidalAndPoloidalAngleOfPoint(
+			pna[i].a,
+			pna[i].b,
+			pna[i].angle,
+			bestMatchA,
+			&toroidalAngle,
+			&poloidalAngle);
 
-    for (unsigned int i = 0; i < pnaCount; i++)
-    {
-        estimateToroidalAndPoloidalAngleOfPoint(
-            pna[i].a,
-            pna[i].b,
-            pna[i].angle,
-            bestMatchA,
-            &toroidalAngle,
-            &poloidalAngle);
+		partialTorusGenerator(pna[i].a, pna[i].b, toroidalAngle - 0.1, toroidalAngle + 0.1, poloidalAngle - 0.2, poloidalAngle + 0.2, pna[i].angle, 800, &(pointCloud2[i]));
 
-        partialTorusGenerator(pna[i].a, pna[i].b, toroidalAngle - 0.2, toroidalAngle + 0.2, poloidalAngle - 0.2, poloidalAngle + 0.2, pna[i].angle, 800, &(pointCloud2[i]));
+		if (doLogOutput)
+		{
+			writePointCloud(f, pointCloud2[i], COLORS[i%MAX_COLORS]);
+		}
 
-        if (doLogOutput)
-        {
-            writePointCloud(f, pointCloud2[i], COLORS[i%MAX_COLORS]);
-        }
+	}
 
-    }
+	Point bestMatchB = findBestPointMatch(pointCloud2[0], pointCloud2, pnaCount);
 
-    Point bestMatchB = findBestPointMatch(pointCloud2[0], pointCloud2, pnaCount);
-    if (doLogOutput)
-    {
-        markPointWithStar(f, bestMatchB, 0x00FF00);
-    }
+	for (unsigned int i = 0; i < pnaCount; i++)
+	{
+		free(pointCloud2[i]);
+		pointCloud2[i] = NULL;
+	}
+
+	if (doLogOutput)
+	{
+		markPointWithStar(f, bestMatchB, 0x00FF00);
+	}
 #ifdef TORI_DEBUG
-    printf("(%f,%f,%f)\n", bestMatchB.x, bestMatchB.y, bestMatchB.z);
+	printf("(%f,%f,%f)\n", bestMatchB.x, bestMatchB.y, bestMatchB.z);
 #endif
 
-    Point **pointCloud3 = malloc(sizeof(void*)* pnaCount);
+	Point **pointCloud3 = malloc(sizeof(void*)* pnaCount);
+
+	for (unsigned int i = 0; i < pnaCount; i++)
+	{
+		estimateToroidalAndPoloidalAngleOfPoint(
+			pna[i].a,
+			pna[i].b,
+			pna[i].angle,
+			bestMatchB,
+			&toroidalAngle,
+			&poloidalAngle);
+
+		partialTorusGenerator(pna[i].a, pna[i].b, toroidalAngle - 0.05, toroidalAngle + 0.05, poloidalAngle - 0.1, poloidalAngle + 0.1, pna[i].angle, 3000, &(pointCloud3[i]));
 
-    for (unsigned int i = 0; i < pnaCount; i++)
-    {
-        estimateToroidalAndPoloidalAngleOfPoint(
-            pna[i].a,
-            pna[i].b,
-            pna[i].angle,
-            bestMatchB,
-            &toroidalAngle,
-            &poloidalAngle);
+		if (doLogOutput)
+		{
+			writePointCloud(f, pointCloud3[i], COLORS[i%MAX_COLORS]);
+		}
 
-        partialTorusGenerator(pna[i].a, pna[i].b, toroidalAngle - 0.05, toroidalAngle + 0.05, poloidalAngle - 0.05, poloidalAngle + 0.05, pna[i].angle, 3000, &(pointCloud3[i]));
+	}
 
-        if (doLogOutput)
-        {
-            writePointCloud(f, pointCloud3[i], COLORS[i%MAX_COLORS]);
-        }
+	Point bestMatchC = findBestPointMatch(pointCloud3[0], pointCloud3, pnaCount);
 
-    }
+	for (unsigned int i = 0; i < pnaCount; i++)
+	{
+		free(pointCloud3[i]);
+		pointCloud3[i] = NULL;
+	}
 
-    Point bestMatchC = findBestPointMatch(pointCloud3[0], pointCloud3, pnaCount);
-    if (doLogOutput)
-    {
-        markPointWithStar(f, bestMatchC, 0xFFFFFF);
-    }
+	if (doLogOutput)
+	{
+		markPointWithStar(f, bestMatchC, 0xFFFFFF);
+	}
 #ifdef TORI_DEBUG
-    printf("(%f,%f,%f)\n", bestMatchC.x, bestMatchC.y, bestMatchC.z);
+	printf("(%f,%f,%f)\n", bestMatchC.x, bestMatchC.y, bestMatchC.z);
 #endif
 
 
-    if (doLogOutput)
-    {
-        updateHeader(f);
-        fclose(f);
-    }
+	if (doLogOutput)
+	{
+		updateHeader(f);
+		fclose(f);
+	}
+
+
 
-    return bestMatchC;
+	return bestMatchC;
 }
 
 static Point makeUnitPoint(Point *p)
 {
-    Point newP;
-    double r = sqrt(p->x*p->x + p->y*p->y + p->z*p->z);
-    newP.x = p->x / r;
-    newP.y = p->y / r;
-    newP.z = p->z / r;
+	Point newP;
+	double r = sqrt(p->x*p->x + p->y*p->y + p->z*p->z);
+	newP.x = p->x / r;
+	newP.y = p->y / r;
+	newP.z = p->z / r;
 
-    return newP;
+	return newP;
 }
 
 static double getPhi(Point p)
 {
-    //    double phi = acos(p.z / (sqrt(p.x*p.x + p.y*p.y + p.z*p.z)));
-    //    double phi = atan(sqrt(p.x*p.x + p.y*p.y)/p.z);
-    double phi = atan(p.x / p.z);
-    return phi;
+	//	double phi = acos(p.z / (sqrt(p.x*p.x + p.y*p.y + p.z*p.z)));
+	//	double phi = atan(sqrt(p.x*p.x + p.y*p.y)/p.z);
+	double phi = atan(p.x / p.z);
+	return phi;
 }
 
 static double getTheta(Point p)
 {
-    //double theta = atan(p.y / p.x);
-    double theta = atan(p.x / p.y);
-    return theta;
+	//double theta = atan(p.y / p.x);
+	double theta = atan(p.x / p.y);
+	return theta;
 }
 
 // subtraction
 static Point PointSub(Point a, Point b)
 {
-    Point newPoint;
+	Point newPoint;
 
-    newPoint.x = a.x - b.x;
-    newPoint.y = a.y - b.y;
-    newPoint.z = a.z - b.z;
+	newPoint.x = a.x - b.x;
+	newPoint.y = a.y - b.y;
+	newPoint.z = a.z - b.z;
 
-    return newPoint;
+	return newPoint;
 }
 
 
diff --git a/tools/lighthousefind_tori/visualization.c b/tools/lighthousefind_tori/visualization.c
index d348c2d..12cbfee 100644
--- a/tools/lighthousefind_tori/visualization.c
+++ b/tools/lighthousefind_tori/visualization.c
@@ -6,89 +6,89 @@ int pointsWritten = 0;
 
 void writePoint(FILE *file, double x, double y, double z, unsigned int rgb)
 {
-    fprintf(file, "%f %f %f %u\n", x, y, z, rgb);
-    pointsWritten++;
+	fprintf(file, "%f %f %f %u\n", x, y, z, rgb);
+	pointsWritten++;
 }
 
 void updateHeader(FILE * file)
 {
-    fseek(file, 0x4C, SEEK_SET);
-    fprintf(file, "%d", pointsWritten);
-    fseek(file, 0x7C, SEEK_SET);
-    fprintf(file, "%d", pointsWritten);
+	fseek(file, 0x4C, SEEK_SET);
+	fprintf(file, "%d", pointsWritten);
+	fseek(file, 0x7C, SEEK_SET);
+	fprintf(file, "%d", pointsWritten);
 }
 void writeAxes(FILE * file)
 {
-    double scale = 5;
-    for (double i = 0; i < scale; i = i + scale / 1000)
-    {
-        writePoint(file, i, 0, 0, 255);
-    }
-    for (double i = 0; i < scale; i = i + scale / 1000)
-    {
-        if ((int)(i / (scale / 5)) % 2 == 1)
-        {
-            writePoint(file, 0, i, 0, 255 << 8);
-        }
-    }
-    for (double i = 0; i < scale; i = i + scale / 10001)
-    {
-        if ((int)(i / (scale / 10)) % 2 == 1)
-        {
-            writePoint(file, 0, 0, i, 255 << 16);
-        }
-    }
+	double scale = 5;
+	for (double i = 0; i < scale; i = i + scale / 1000)
+	{
+		writePoint(file, i, 0, 0, 255);
+	}
+	for (double i = 0; i < scale; i = i + scale / 1000)
+	{
+		if ((int)(i / (scale / 5)) % 2 == 1)
+		{
+			writePoint(file, 0, i, 0, 255 << 8);
+		}
+	}
+	for (double i = 0; i < scale; i = i + scale / 10001)
+	{
+		if ((int)(i / (scale / 10)) % 2 == 1)
+		{
+			writePoint(file, 0, 0, i, 255 << 16);
+		}
+	}
 }
 
 void drawLineBetweenPoints(FILE *file, Point a, Point b, unsigned int color)
 {
-    int max = 50;
-    for (int i = 0; i < max; i++)
-    {
-        writePoint(file,
-            (a.x*i + b.x*(max - i)) / max,
-            (a.y*i + b.y*(max - i)) / max,
-            (a.z*i + b.z*(max - i)) / max,
-            color);
-    }
+	int max = 50;
+	for (int i = 0; i < max; i++)
+	{
+		writePoint(file,
+			(a.x*i + b.x*(max - i)) / max,
+			(a.y*i + b.y*(max - i)) / max,
+			(a.z*i + b.z*(max - i)) / max,
+			color);
+	}
 }
 
 void writePcdHeader(FILE * file)
 {
-    fprintf(file, "VERSION 0.7\n");
-    fprintf(file, "FIELDS  x y z rgb\n");
-    fprintf(file, "SIZE 4 4 4 4\n");
-    fprintf(file, "TYPE F F F U\n");
-    fprintf(file, "COUNT 1 1 1 1\n");
-    fprintf(file, "WIDTH        \n");
-    fprintf(file, "HEIGHT 1\n");
-    fprintf(file, "VIEWPOINT 0 0 0 1 0 0 0\n");
-    fprintf(file, "POINTS        \n");
-    fprintf(file, "DATA ascii\n");
+	fprintf(file, "VERSION 0.7\n");
+	fprintf(file, "FIELDS  x y z rgb\n");
+	fprintf(file, "SIZE 4 4 4 4\n");
+	fprintf(file, "TYPE F F F U\n");
+	fprintf(file, "COUNT 1 1 1 1\n");
+	fprintf(file, "WIDTH		\n");
+	fprintf(file, "HEIGHT 1\n");
+	fprintf(file, "VIEWPOINT 0 0 0 1 0 0 0\n");
+	fprintf(file, "POINTS		\n");
+	fprintf(file, "DATA ascii\n");
 
-    //fprintf(file, "100000.0, 100000.0, 100000\n");
+	//fprintf(file, "100000.0, 100000.0, 100000\n");
 
 }
 
 void writePointCloud(FILE *f, Point *pointCloud, unsigned int Color)
 {
-    Point *currentPoint = pointCloud;
+	Point *currentPoint = pointCloud;
 
-    while (currentPoint->x != -1000 || currentPoint->y != -1000 || currentPoint->z != -1000)
-    {
-        writePoint(f, currentPoint->x, currentPoint->y, currentPoint->z, Color);
-        currentPoint++;
-    }
+	while (currentPoint->x != -1000 || currentPoint->y != -1000 || currentPoint->z != -1000)
+	{
+		writePoint(f, currentPoint->x, currentPoint->y, currentPoint->z, Color);
+		currentPoint++;
+	}
 }
 
 void markPointWithStar(FILE *file, Point point, unsigned int color)
 {
-    double i;
-    for (i = -0.8; i <= 0.8; i = i + 0.0025)
-    {
-        writePoint(file, point.x + i, point.y, point.z, color);
-        writePoint(file, point.x, point.y + i, point.z, color);
-        writePoint(file, point.x, point.y, point.z + i, color);
-    }
+	double i;
+	for (i = -0.8; i <= 0.8; i = i + 0.0025)
+	{
+		writePoint(file, point.x + i, point.y, point.z, color);
+		writePoint(file, point.x, point.y + i, point.z, color);
+		writePoint(file, point.x, point.y, point.z + i, color);
+	}
 
 }
diff --git a/tools/lighthousefind_tori/visualization.h b/tools/lighthousefind_tori/visualization.h
index f0263eb..da69ed2 100644
--- a/tools/lighthousefind_tori/visualization.h
+++ b/tools/lighthousefind_tori/visualization.h
@@ -23,24 +23,24 @@ void markPointWithStar(FILE *file, Point point, unsigned int color);
 
 #define MAX_COLORS 18
 static unsigned int COLORS[] = {
-    0x00FFFF,
-    0xFF00FF,
-    0xFFFF00,
-    0xFF0000,
-    0x00FF00,
-    0x0000FF,
-    0x0080FF,
-    0x8000FF,
-    0x80FF00,
-    0x00FF80,
-    0xFF0080,
-    0xFF8000,
-    0x008080,
-    0x800080,
-    0x808000,
-    0x000080,
-    0x008000,
-    0x800000
+	0x00FFFF,
+	0xFF00FF,
+	0xFFFF00,
+	0xFF0000,
+	0x00FF00,
+	0x0000FF,
+	0x0080FF,
+	0x8000FF,
+	0x80FF00,
+	0x00FF80,
+	0xFF0080,
+	0xFF8000,
+	0x008080,
+	0x800080,
+	0x808000,
+	0x000080,
+	0x008000,
+	0x800000
 };
 #endif